BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F11SP1|AL428096
(957 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig671 1712 0.0
>3x_Contig671
Length = 1730
Score = 1712 bits (863), Expect = 0.0
Identities = 882/886 (99%), Gaps = 2/886 (0%)
Strand = Plus / Plus
Query: 1 gatctaatngatagaatactacactggtgattacaaattttatactgataaatttcaata 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gatctaat-gatagaatactacactggtgattacaaattttatactgataaatttcaata 904
Query: 61 tgattcggcattgttaaagcaagagtgccacagcagctcccaattttggtttgggaaacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tgattcggcattgttaaagcaagagtgccacagcagctcccaattttggtttgggaaacg 964
Query: 121 atccgttgaacctattgtgccaacaaagaagaatctagtgacgttttgtaagtactgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 atccgttgaacctattgtgccaacaaagaagaatctagtgacgttttgtaagtactgtga 1024
Query: 181 ttttcatgatgtctgcggatggagagctaatggcaacaagatgttcaaacaactaggtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 ttttcatgatgtctgcggatggagagctaatggcaacaagatgttcaaacaactaggtcc 1084
Query: 241 taccttagaagagataagtaaactctaggtgctaccggccaccacttgatatccatgcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 taccttagaagagataagtaaactctaggtgctaccggccaccacttgatatccatgcta 1144
Query: 301 tctatatatgtttttaatatttattatttatttgttagcttaattacaatgtcctttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 tctatatatgtttttaatatttattatttatttgttagcttaattacaatgtcctttcaa 1204
Query: 361 tagaggctgctttgaccgttcactcaaccaatgggtatctctgctcctcttgaaacgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 tagaggctgctttgaccgttcactcaaccaatgggtatctctgctcctcttgaaacgttc 1264
Query: 421 tctacgctgcccttgccctaatgggaagtccgacaggaaaagccgttagttaaagaagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 tctacgctgcccttgccctaatgggaagtccgacaggaaaagccgttagttaaagaagat 1324
Query: 481 ctgtgccaagtaattcaacggcagcgaa-cagccatcgatgaatcgaacctttgtcccta 539
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1325 ctgtgccaagtaattcaacggcagcgaagcagccatcgatgaatcgaacctttgtcccta 1384
Query: 540 gaactcactgttggatccattaaatacataccaatcgatttgaataaagaaccattagac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 gaactcactgttggatccattaaatacataccaatcgatttgaataaagaaccattagac 1444
Query: 600 atgggaggccaggacccggcaggcttcgggatatccgtgctccgatcatgataggttcca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1445 atgggaggccaggacccggcaggcttcgggatatccgtgctccgatcatgataggttcca 1504
Query: 660 aagctaggaggcaccataccgttgtacatacttgaagcttctctacagaagtcagtgtcg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 aagctaggaggcaccataccgttgtacatacttgaagcttctctacagaagtcagtgtcg 1564
Query: 720 aatttgtcgtccagttccttcttcaactgagcacctattgctgctgactcttaccaatca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 aatttgtcgtccagttccttcttcaactgagcacctattgctgctgactcttaccaatca 1624
Query: 780 tatagtattccaaacggggtagaacttccaagaaaatggttcaattggtttgccgatggg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 tatagtattccaaacggggtagaacttccaagaaaatggttcaattggtttgccgatggg 1684
Query: 840 gctatgttccttatcgtttcggattgactgcaaaagtcaggcaggc 885
|||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 1685 gctatgttccttatcgtttcggattgactgcanaagtcaagcaggc 1730
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6442
Number of Sequences: 1807
Number of extensions: 6442
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 957
length of database: 10,358,551
effective HSP length: 16
effective length of query: 941
effective length of database: 10,329,639
effective search space: 9720190299
effective search space used: 9720190299
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)